![]() |
| Page III: View gene by gene: |
| Sequence: Yersinia pseudotuberculosis IP 32953 plasmid pYV, complete |
| Kingdom: Bacteria, Group: Gammaproteobacteria, Genetic code: 11 |
| Species | GenBank | RefSeq | Size (bp) | G+C% | PubMed | Shape |
| Yersinia pseudotuberculosis IP32953 | BX936399 | NC_006153 | 68,526 | 15358858 | circular |
| Compare to RefSeq | # of genes | Detail | Category | |
| Exact match | 60 | list | ![]() |
|
| Different start | 18 | list | ![]() |
|
| Novel genes | 14 (5)![]() |
list | ![]() |
|
| Not confirmed genes | 17 (3)![]() |
list | ||
| All predictions: | |||||||
|
Tools legend: SD - Seq DNA; SP - Seq Pro; BD - BLAST DNA; BP - BLAST Pro; GB - GenBank Record |
|||||||
| Index | Strand | Left End | Right End | bp | Class![]() |
Cat. | Tools |
| 1 | - | 12 | 2210 | 2199 | 1 | ![]() | SD SP BD BP; GB |
| 2 | - | 2218 | 2667 | 450 | 1 | ![]() | SD SP BD BP; GB |
| 3 | - | 2919 | 3155 | 237 | 1 | ![]() | SD SP BD BP; GB |
| 4 | - | 3411 | 3650 | 240 | 1 | ![]() | SD SP BD BP; GB |
| 5 | + | 3778 | 3996 | 219 | 1 | ![]() | SD SP BD BP; |
| 6 | + | 4319 | 4573 | 255 | 2 | ![]() | SD SP BD BP; |
| 7 | - | 4823 | 5689 | 867 | 1 | ![]() | SD SP BD BP; GB |
| 8 | - | 5686 | 5958 | 273 | 2 | ![]() | SD SP BD BP; |
| 9 | - | 5998 | 6252 | 255 | 1 | ![]() | SD SP BD BP; GB |
| 10 | - | 6390 | 6701 | 312 | 2 | ![]() | SD SP BD BP; |
| 11 | - | 7055 | 7462 | 408 | 1 | ![]() | SD SP BD BP; |
| 12 | - | 7489 | 7806 | 318 | 1 | ![]() | SD SP BD BP; GB |
| 13 | - | 7978 | 8436 | 459 | 1 | ![]() | SD SP BD BP; GB |
| 14 | + | 8586 | 8774 | 189 | 1 | ![]() | SD SP BD BP; GB |
| 15 | - | 9103 | 10401 | 1299 | 1 | ![]() | SD SP BD BP; GB |
| 16 | + | 11219 | 11389 | 171 | 1 | ![]() | SD SP BD BP; |
| 17 | - | 11386 | 13701 | 2316 | 1 | ![]() | SD SP BD BP; GB |
| 18 | + | 13865 | 14416 | 552 | 2 | ![]() | SD SP BD BP; GB |
| 19 | + | 14435 | 14899 | 465 | 2 | ![]() | SD SP BD BP; |
| 20 | + | 15038 | 15367 | 330 | 2 | ![]() | SD SP BD BP; |
| 21 | + | 15467 | 15733 | 267 | 1 | ![]() | SD SP BD BP; GB |
| 22 | + | 15811 | 16566 | 756 | 1 | ![]() | SD SP BD BP; GB |
| 23 | - | 16714 | 17139 | 426 | 1 | ![]() | SD SP BD BP; GB |
| 24 | - | 17484 | 17915 | 432 | 1 | ![]() | SD SP BD BP; GB |
| 25 | - | 17915 | 19063 | 1149 | 1 | ![]() | SD SP BD BP; GB |
| 26 | + | 19220 | 19834 | 615 | 1 | ![]() | SD SP BD BP; GB |
| 27 | - | 19897 | 20289 | 393 | 1 | ![]() | SD SP BD BP; GB |
| 28 | + | 20558 | 21142 | 585 | 1 | ![]() | SD SP BD BP; GB |
| 29 | - | 21282 | 21581 | 300 | 1 | ![]() | SD SP BD BP; GB |
| 30 | - | 21574 | 21816 | 243 | 1 | ![]() | SD SP BD BP; GB |
| 31 | + | 22455 | 22532 | 78 | 1 | ![]() | SD SP BD BP; GB |
| 32 | - | 22682 | 22963 | 282 | 1 | ![]() | SD SP BD BP; GB |
| 33 | - | 23123 | 24085 | 963 | 1 | ![]() | SD SP BD BP; GB |
| 34 | - | 24085 | 25293 | 1209 | 1 | ![]() | SD SP BD BP; GB |
| 35 | - | 26051 | 26245 | 195 | 1 | ![]() | SD SP BD BP; GB |
| 36 | - | 26357 | 26815 | 459 | 1 | ![]() | SD SP BD BP; GB |
| 37 | - | 26842 | 27102 | 261 | 1 | ![]() | SD SP BD BP; GB |
| 38 | - | 27269 | 27874 | 606 | 1 | ![]() | SD SP BD BP; |
| 39 | - | 27894 | 28007 | 114 | 2 | ![]() | SD SP BD BP; |
| 40 | - | 27997 | 28137 | 141 | 1 | ![]() | SD SP BD BP; |
| 41 | - | 28491 | 29039 | 549 | 1 | ![]() | SD SP BD BP; GB |
| 42 | + | 29624 | 30481 | 858 | 1 | ![]() | SD SP BD BP; GB |
| 43 | + | 30481 | 30873 | 393 | 1 | ![]() | SD SP BD BP; GB |
| 44 | - | 30917 | 31228 | 312 | 2 | ![]() | SD SP BD BP; |
| 45 | + | 31576 | 31995 | 420 | 2 | ![]() | SD SP BD BP; GB |
| 46 | - | 32524 | 32796 | 273 | 1 | ![]() | SD SP BD BP; GB |
| 47 | + | 32974 | 33189 | 216 | 1 | ![]() | SD SP BD BP; GB |
| 48 | - | 33232 | 34821 | 1590 | 1 | ![]() | SD SP BD BP; GB |
| 49 | - | 35209 | 35358 | 150 | 1 | ![]() | SD SP BD BP; GB |
| 50 | + | 35404 | 35559 | 156 | 1 | ![]() | SD SP BD BP; |
| 51 | + | 35593 | 35916 | 324 | 1 | ![]() | SD SP BD BP; GB |
| 52 | - | 36551 | 37471 | 921 | 1 | ![]() | SD SP BD BP; GB |
| 53 | - | 37490 | 38695 | 1206 | 1 | ![]() | SD SP BD BP; GB |
| 54 | - | 38673 | 39179 | 507 | 2 | ![]() | SD SP BD BP; GB |
| 55 | - | 39192 | 40172 | 981 | 1 | ![]() | SD SP BD BP; GB |
| 56 | - | 40174 | 40461 | 288 | 1 | ![]() | SD SP BD BP; GB |
| 57 | - | 40503 | 40943 | 441 | 1 | ![]() | SD SP BD BP; GB |
| 58 | - | 40940 | 43054 | 2115 | 1 | ![]() | SD SP BD BP; GB |
| 59 | - | 43041 | 43385 | 345 | 1 | ![]() | SD SP BD BP; GB |
| 60 | - | 43382 | 43750 | 369 | 1 | ![]() | SD SP BD BP; GB |
| 61 | - | 43747 | 44118 | 372 | 1 | ![]() | SD SP BD BP; GB |
| 62 | - | 44105 | 44359 | 255 | 1 | ![]() | SD SP BD BP; GB |
| 63 | - | 44364 | 45245 | 882 | 1 | ![]() | SD SP BD BP; GB |
| 64 | + | 45530 | 46762 | 1233 | 1 | ![]() | SD SP BD BP; GB |
| 65 | + | 46759 | 47223 | 465 | 1 | ![]() | SD SP BD BP; GB |
| 66 | + | 47223 | 48470 | 1248 | 1 | ![]() | SD SP BD BP; GB |
| 67 | + | 48588 | 49511 | 924 | 1 | ![]() | SD SP BD BP; GB |
| 68 | + | 49508 | 50161 | 654 | 1 | ![]() | SD SP BD BP; GB |
| 69 | + | 50163 | 50429 | 267 | 1 | ![]() | SD SP BD BP; GB |
| 70 | + | 50426 | 51211 | 786 | 1 | ![]() | SD SP BD BP; GB |
| 71 | + | 51211 | 52275 | 1065 | 1 | ![]() | SD SP BD BP; GB |
| 72 | + | 52851 | 53246 | 396 | 1 | ![]() | SD SP BD BP; GB |
| 73 | + | 53370 | 54185 | 816 | 1 | ![]() | SD SP BD BP; GB |
| 74 | + | 54323 | 54397 | 75 | 1 | ![]() | SD SP BD BP; |
| 75 | + | 54588 | 55001 | 414 | 1 | ![]() | SD SP BD BP; GB |
| 76 | + | 55007 | 56830 | 1824 | 1 | ![]() | SD SP BD BP; GB |
| 77 | + | 56827 | 58086 | 1260 | 1 | ![]() | SD SP BD BP; GB |
| 78 | + | 58083 | 58283 | 201 | 1 | ![]() | SD SP BD BP; GB |
| 79 | + | 58284 | 58547 | 264 | 2 | ![]() | SD SP BD BP; GB |
| 80 | + | 58549 | 58896 | 348 | 1 | ![]() | SD SP BD BP; GB |
| 81 | + | 58893 | 59390 | 498 | 1 | ![]() | SD SP BD BP; GB |
| 82 | + | 59391 | 59738 | 348 | 1 | ![]() | SD SP BD BP; GB |
| 83 | + | 59745 | 60479 | 735 | 1 | ![]() | SD SP BD BP; GB |
| 84 | + | 60479 | 61108 | 630 | 1 | ![]() | SD SP BD BP; GB |
| 85 | + | 61087 | 61719 | 633 | 1 | ![]() | SD SP BD BP; GB |
| 86 | + | 61944 | 62291 | 348 | 1 | ![]() | SD SP BD BP; GB |
| 87 | + | 62839 | 63105 | 267 | 1 | ![]() | SD SP BD BP; GB |
| 88 | + | 63141 | 63563 | 423 | 1 | ![]() | SD SP BD BP; GB |
| 89 | + | 63967 | 64146 | 180 | 2 | ![]() | SD SP BD BP; GB |
| 90 | - | 64367 | 65773 | 1407 | 1 | ![]() | SD SP BD BP; GB |
| 91 | + | 66214 | 66690 | 477 | 1 | ![]() | SD SP BD BP; GB |
| 92 | - | 67276 | 68142 | 867 | 1 | ![]() | SD SP BD BP; GB |
|   | |||||||
| Not confirmed genes annotated in RefSeq: | |||||||
| 1 | + | 5803 | 5955 | 152 | |||
| 2 | + | 6779 | 7183 | 404 | |||
| 3 | - | 8771 | 8980 | 209 | |||
| 4 | - | 21960 | 22163 | 203 | |||
| 5 | + | 25800 | 25913 | 113 | |||
| 6 | - | 28171 | 28353 | 182 | |||
| 7 | + | 31368 | 31559 | 191 | |||
| 8 | - | 35009 | 35104 | 95 | |||
| 9 | + | 35445 | 35567 | 122 | |||
| 10 | + | 35951 | 36073 | 122 | |||
| 11 | + | 36160 | 36327 | 167 | |||
| 12 | + | 45305 | 45409 | 104 | |||
| 13 | + | 54264 | 54362 | 98 | |||
| 14 | + | 63560 | 63961 | 401 | |||
| 15 | - | 66692 | 66820 | 128 | |||
| 16 | - | 66903 | 66995 | 92 | |||
| 17 | - | 68143 | 68277 | 134 | |||
| 11/30/06, beta 0.1 | Help | History | Give us | To-do | FAQ |
| ©2006 GeneMark |